1LOU Ribosome date Nov 25, 1998
title Ribosomal Protein S6
authors D.E.Otzen, O.Kristensen, M.Proctor, M.Oliveberg
compound source
Molecule: Ribosomal Protein S6
Chain: A
Engineered: Yes
Mutation: Yes
 Organism_scientific: Thermus Thermophilus
Organism_taxid: 274
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: C 2 2 2
R_factor 0.197 R_Free 0.247
crystal
cell
length a length b length c angle alpha angle beta angle gamma
52.555 105.805 41.204 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.95 Å
related structures by homologous chain: 1CQM, 1RIS
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural changes in the transition state of protein folding: alternative interpretations of curved chevron plots., Otzen DE, Kristensen O, Proctor M, Oliveberg M, Biochemistry 1999 May 18;38(20):6499-511. PMID:10350468
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (21 Kb) [Save to disk]
  • Biological Unit Coordinates (1lou.pdb1.gz) 18 Kb
  • CSU: Contacts of Structural Units for 1LOU
  • Likely Quarternary Molecular Structure file(s) for 1LOU
  • Structure Factors (119 Kb)
  • Retrieve 1LOU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1LOU from S2C, [Save to disk]
  • Re-refined 1lou structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1LOU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1LOU
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1LOU, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1loua_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1lou] [1lou_A]
  • SWISS-PROT database: [P23370]
  • Domain organization of [RS6_THETH] by SWISSPFAM
    • Other resources with information on 1LOU
  • Community annotation for 1LOU at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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