1LQL	Unknown Function	date	May 10, 2002
title	Crystal Structure Of Osmc Like Protein From Mycoplasma Pneumoniae
authors	I.G.Choi, D.H.Shin, J.Brandsen, J.Jancarik, R.Kim, H.Yokota, S. H.Kim, Berkeley Structural Genomics Center (Bsgc)
compound		source
Molecule: Osmotical Inducible Protein C Like Family Chain: A, B, C, D, E, F, G, H, I, J Synonym: Osmc Engineered: Yes		Organism_scientific: Mycoplasma Pneumoniae Organism_taxid: 2104 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 21 21 21	R_factor 0.217 R_Free 0.276
crystal cell	length a length b length c angle alpha angle beta angle gamma 66.360 95.600 308.480 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.85 Å
Gene Ontology	Chain Function Process Component F, A, J, E, B, H, C, D, I, G peroxidase activity
Primary reference	Crystal structure of a stress inducible protein from Mycoplasma pneumoniae at 2.85 A resolution., Choi IG, Shin DH, Brandsen J, Jancarik J, Busso D, Yokota H, Kim R, Kim SH, J Struct Funct Genomics 2003;4(1):31-4. PMID:12943365

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (236 Kb) [Save to disk] Biological Unit Coordinates (1lql.pdb1.gz) 48 Kb Biological Unit Coordinates (1lql.pdb2.gz) 49 Kb Biological Unit Coordinates (1lql.pdb3.gz) 49 Kb Biological Unit Coordinates (1lql.pdb4.gz) 47 Kb Biological Unit Coordinates (1lql.pdb5.gz) 49 Kb CSU: Contacts of Structural Units for 1LQL Likely Quarternary Molecular Structure file(s) for 1LQL Retrieve 1LQL in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1LQL from S2C, [Save to disk]

View 1LQL in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1LQL

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1LQL, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1lqla_, region A [Jmol] [rasmolscript] [script source]     - Domain d1lqlb_, region B [Jmol] [rasmolscript] [script source]     - Domain d1lqlc_, region C [Jmol] [rasmolscript] [script source]     - Domain d1lqld_, region D [Jmol] [rasmolscript] [script source]     - Domain d1lqle_, region E [Jmol] [rasmolscript] [script source]     - Domain d1lqlf_, region F [Jmol] [rasmolscript] [script source]     - Domain d1lqlg_, region G [Jmol] [rasmolscript] [script source]     - Domain d1lqlh_, region H [Jmol] [rasmolscript] [script source]     - Domain d1lqli_, region I [Jmol] [rasmolscript] [script source]     - Domain d1lqlj_, region J [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1lql_B] [1lql_G] [1lql_F] [1lql_H] [1lql] [1lql_J] [1lql_D] [1lql_E] [1lql_C] [1lql_I] [1lql_A] SWISS-PROT database: [P75170] Domain organization of [Y625_MYCPN] by SWISSPFAM

Other resources with information on 1LQL

Community annotation for 1LQL at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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