1LSP Hydrolase (O-Glycosyl) date Feb 09, 1995
title The Crystal Structure Of A Bulgecin-Inhibited G-Type Lysozym Egg-White Of The Australian Black Swan. A Comparison Of The Of Bulgecin To Three Muramidases
authors S.Karlsen, Z.H.Rao, E.Hough, N.W.Isaacs
compound source
Molecule: Lysozyme
Chain: A
Synonym: Mucopeptide N-Acetylmuramylhydrolase
Ec: 3.2.1.17
Organism_scientific: Cygnus Atratus
Organism_common: Black Swan
Organism_taxid: 8868
Cellular_location: Egg White
symmetry Space Group: P 21 21 2
R_factor
R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
91.690 65.330 38.150 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.45 Å
ligand BUL enzyme Hydrolase E.C.3.2.1.17 BRENDA
related structures by homologous chain: 1GBS
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure of a bulgecin-inhibited g-type lysozyme from the egg white of the Australian black swan. A comparison of the binding of bulgecin to three muramidases., Karlsen S, Hough E, Rao ZH, Isaacs NW, Acta Crystallogr D Biol Crystallogr. 1996 Jan 1;52(Pt 1):105-14. PMID:15299731
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (36 Kb) [Save to disk]
  • Biological Unit Coordinates (1lsp.pdb1.gz) 32 Kb
  • LPC: Ligand-Protein Contacts for 1LSP
  • CSU: Contacts of Structural Units for 1LSP
  • Likely Quarternary Molecular Structure file(s) for 1LSP
  • Structure Factors (63 Kb)
  • Retrieve 1LSP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1LSP from S2C, [Save to disk]
  • Re-refined 1lsp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1LSP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1LSP
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1LSP, from MSDmotif at EBI
  • Genome occurence of 1LSP's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1lsp__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1lsp_A] [1lsp]
  • SWISS-PROT database: [P00717]
  • Domain organization of [LYG_CYGAT] by SWISSPFAM
  • Other resources with information on 1LSP
  • Community annotation for 1LSP at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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