1LVZ Peptide Binding Protein date May 30, 2002
title Metarhodopsin II Bound Structure Of C-Terminal Peptide Of Al Subunit Of Transducin
authors B.W.Koenig, G.Kontaxis, D.C.Mitchell, J.M.Louis, B.J.Litman, A.Ba
compound source
Molecule: Guanine Nucleotide-Binding Protein G(T), Alpha-1
Chain: A
Fragment: S2 Peptide, Residues 339-349
Synonym: Transducin Alpha-1 Chain
Engineered: Yes
Mutation: Yes
Organism_scientific: Bos Taurus
Organism_common: Cattle
Organism_taxid: 9913
Gene: Gnat1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Gev-S2
methodSolution NMR
Primary referenceStructure and orientation of a G protein fragment in the receptor bound state from residual dipolar couplings., Koenig BW, Kontaxis G, Mitchell DC, Louis JM, Litman BJ, Bax A, J Mol Biol 2002 Sep 13;322(2):441-61. PMID:12217702
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (48 Kb) [Save to disk]
  • Biological Unit Coordinates (1lvz.pdb1.gz) 3 Kb
  • CSU: Contacts of Structural Units for 1LVZ
  • Original NMR restraints for 1LVZ from PDB
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1LVZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1LVZ from S2C, [Save to disk]
  • View 1LVZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1LVZ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1LVZ, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1lvza_, region A [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1lvz_A] [1lvz]
  • SWISS-PROT database: [P04695]
  • Domain organization of [GNAT1_BOVIN] by SWISSPFAM
  • Other resources with information on 1LVZ
  • Community annotation for 1LVZ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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