1LWJ Transferase date May 31, 2002
title Crystal Structure Of T. Maritima 4-Alpha-Glucanotransferase Complex
authors A.Roujeinikova, C.Raasch, S.Sedelnikova, W.Liebl, D.W.Rice
compound source
Molecule: 4-Alpha-Glucanotransferase
Chain: A, B
Synonym: Maltodextrin Glycosyltransferase, Amylomaltase, D- Disproportionating Enzyme, Oligo-1,4-1,4-Glucanotransferase
Ec: 2.4.1.25
Engineered: Yes
Organism_scientific: Thermotoga Maritima
Organism_taxid: 2336
Gene: Mgt
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: M5219
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Ptam1
symmetry Space Group: I 2 2 2
R_factor 0.225 R_Free 0.302
crystal
cell
length a length b length c angle alpha angle beta angle gamma
94.542 181.354 197.317 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.50 Å
ligand ACG, CA enzyme Transferase E.C.2.4.1.25 BRENDA
related structures by homologous chain: 1LWH
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • 4-alpha-glucanotransferase a...


  • Primary referenceCrystal structure of Thermotoga maritima 4-alpha-glucanotransferase and its acarbose complex: implications for substrate specificity and catalysis., Roujeinikova A, Raasch C, Sedelnikova S, Liebl W, Rice DW, J Mol Biol 2002 Aug 2;321(1):149-62. PMID:12139940
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (143 Kb) [Save to disk]
  • Biological Unit Coordinates (1lwj.pdb1.gz) 137 Kb
  • LPC: Ligand-Protein Contacts for 1LWJ
  • CSU: Contacts of Structural Units for 1LWJ
  • Likely Quarternary Molecular Structure file(s) for 1LWJ
  • Retrieve 1LWJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1LWJ from S2C, [Save to disk]
  • View 1LWJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1LWJ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1LWJ, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1lwja2, region A:1-391 [Jmol] [rasmolscript] [script source]
        - Domain d1lwja1, region A:392-441 [Jmol] [rasmolscript] [script source]
        - Domain d1lwjb2, region B:442-832 [Jmol] [rasmolscript] [script source]
        - Domain d1lwjb1, region B:833-882 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1lwj_A] [1lwj] [1lwj_B]
  • SWISS-PROT database: [P80099]
  • Domain organization of [MGTA_THEMA] by SWISSPFAM
  • Domain found in 1LWJ: [Aamy ] by SMART
  • Other resources with information on 1LWJ
  • Community annotation for 1LWJ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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