1LYR THEORETICAL MODEL OF BOVINE AP LYASE, BAP1 date 2002-06-08
authors Khurshid, R, Salim, A, Abbasi, A
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Primary referenceThree-dimensional structure prediction of bovine AP lyase, BAP1: prediction of interaction with DNA and alterations as a result of Arg176-->Ala, Asp282-->Ala, and His308-->Asn mutations., Khurshid R, Salim A, Abbasi A, Biochem Biophys Res Commun. 2005 Jan 28;326(4):711-7. PMID:15607727
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (51 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 1LYR
  • SEQRES to COORDINATES correlation for 1LYR from S2C, [Save to disk]
    • View 1LYR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1LYR
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • SWISS-PROT database: [P23196]
  • Domain organization of [APEX1_BOVIN] by SWISSPFAM
    • Other resources with information on 1LYR
  • Community annotation for 1LYR at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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