1LZ1 Hydrolase (O-Glycosyl) date Oct 12, 1984
title Refinement Of Human Lysozyme At 1.5 Angstroms Resolution. An Non-Bonded And Hydrogen-Bond Interactions
authors P.J.Artymiuk, C.C.F.Blake
compound source
Molecule: Human Lysozyme
Chain: A
Ec: 3.2.1.17
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: P 21 21 21
R_factor 0.177 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
57.130 60.990 32.890 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.50 Å
ligand
enzyme Hydrolase E.C.3.2.1.17 BRENDA
related structures by homologous chain: 1IWZ, 1REX
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceRefinement of human lysozyme at 1.5 A resolution analysis of non-bonded and hydrogen-bond interactions., Artymiuk PJ, Blake CC, J Mol Biol 1981 Nov 15;152(4):737-62. PMID:7334520
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (25 Kb) [Save to disk]
  • Biological Unit Coordinates (1lz1.pdb1.gz) 22 Kb
  • CSU: Contacts of Structural Units for 1LZ1
  • Likely Quarternary Molecular Structure file(s) for 1LZ1
  • Retrieve 1LZ1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1LZ1 from S2C, [Save to disk]
    • View 1LZ1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1LZ1
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Conformational Epitope Prediction for 1LZ1 from the CEP Server.
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1LZ1, from MSDmotif at EBI
  • Genome occurence of 1LZ1's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1lz1__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1lz1] [1lz1_A]
  • SWISS-PROT database: [P61626]
  • Domain organization of [LYSC_HUMAN] by SWISSPFAM
  • Domain found in 1LZ1: [LYZ1 ] by SMART
    • Other resources with information on 1LZ1
  • Community annotation for 1LZ1 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Domain movements in 1LZ1 from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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