1M39 Cell Cycle date Jun 27, 2002
title Solution Structure Of The C-Terminal Fragment (F86-I165) Of Centrin 2 In Calcium Saturated Form
authors E.Matei, S.Miron, Y.Blouquit, P.Duchambon, P.Durussel, J.A.Cox, C.
compound source
Molecule: Caltractin, Isoform 1
Chain: A
Fragment: C-Terminus (Residues 84-172)
Synonym: Centrin 2
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Cen2
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet24a(+)
methodSolution NMR
related structures by homologous chain: 1OQP
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceC-terminal half of human centrin 2 behaves like a regulatory EF-hand domain., Matei E, Miron S, Blouquit Y, Duchambon P, Durussel I, Cox JA, Craescu CT, Biochemistry 2003 Feb 18;42(6):1439-50. PMID:12578356
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (534 Kb) [Save to disk]
  • Biological Unit Coordinates (1m39.pdb1.gz) 21 Kb
  • CSU: Contacts of Structural Units for 1M39
  • Original NMR restraints for 1M39 from PDB
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1M39 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1M39 from S2C, [Save to disk]
  • View 1M39 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1M39
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1M39, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1m39a_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1m39] [1m39_A]
  • SWISS-PROT database: [P41208]
  • Domain organization of [CETN2_HUMAN] by SWISSPFAM
  • Domain found in 1M39: [EFh ] by SMART
  • Other resources with information on 1M39
  • Community annotation for 1M39 at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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