1M5N	Protein Transport	date	Jul 09, 2002
title	Crystal Structure Of Heat Repeats (1-11) Of Importin B Bound Non-Classical Nls(67-94) Of Pthrp
authors	G.Cingolani, J.Bednenko, M.T.Gillespie, L.Gerace
compound		source
Molecule: Importin Beta-1 Subunit Chain: S Fragment: N-Terminal Domain (Residues 1-485) Synonym: Karyopherin Beta-1 Subunit, Nuclear Factor P97, Im Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Bl21 Expression_system_taxid: 511693 Expression_system_strain: Bl21 Expression_system_vector_type: Plasmid Expression_system_plasmid: Ptyb4
Molecule: Parathyroid Hormone-Related Protein Chain: Q Fragment: Residues 67-94 Synonym: Pthrp, Pth-Rp Engineered: Yes		Synthetic: Yes Other_details: The Peptide Was Chemically Synthesized. The Of The Peptide Is Naturally Found In Homo Sapiens (Human).
symmetry	Space Group: C 2 2 21	R_factor 0.250 R_Free 0.297
crystal cell	length a length b length c angle alpha angle beta angle gamma 92.792 105.447 146.738 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.90 Å
note	1M5N is a representative structure
related structures	by homologous chain: 1O6P, 1UKL
Gene Ontology	Chain Function Process Component Q S
Primary reference	Molecular basis for the recognition of a nonclassical nuclear localization signal by importin beta., Cingolani G, Bednenko J, Gillespie MT, Gerace L, Mol Cell 2002 Dec;10(6):1345-53. PMID:12504010

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (86 Kb) [Save to disk] Biological Unit Coordinates (1m5n.pdb1.gz) 81 Kb CSU: Contacts of Structural Units for 1M5N Likely Quarternary Molecular Structure file(s) for 1M5N Retrieve 1M5N in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1M5N from S2C, [Save to disk]

View 1M5N in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1M5N

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1M5N, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1m5ns_, region S [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1m5n] [1m5n_S] [1m5n_Q] SWISS-PROT database: [Q14974] [P12272] Belongs to the eukaryotic nuclear pore complex (e-npc) family according to TCDB. Domain organization of [IMB1_HUMAN] [PTHR_HUMAN] by SWISSPFAM Domain found in 1M5N: [IBN_N ] by SMART

Other resources with information on 1M5N

Community annotation for 1M5N at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---