1M7X The X-ray Crystallographic Structure of Branching Enzyme date
authors Abad, M.C., Binderup, K., Rios-Steiner, J., Arni, R.K., Preiss, J., Geiger, J.H.
compound source
symmetry
R_factor
R_Free 0.2653
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.30
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceThe X-ray crystallographic structure of Escherichia coli branching enzyme., Abad MC, Binderup K, Rios-Steiner J, Arni RK, Preiss J, Geiger JH, J Biol Chem 2002 Nov 1;277(44):42164-70. Epub 2002 Aug 23. PMID:12196524
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (399 Kb) [Save to disk]
  • Biological Unit Coordinates (1m7x.pdb1.gz) 103 Kb
  • Biological Unit Coordinates (1m7x.pdb2.gz) 104 Kb
  • Biological Unit Coordinates (1m7x.pdb3.gz) 99 Kb
  • Biological Unit Coordinates (1m7x.pdb4.gz) 103 Kb
  • CSU: Contacts of Structural Units for 1M7X
  • Likely Quarternary Molecular Structure file(s) for 1M7X
  • Retrieve 1M7X in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1M7X from S2C, [Save to disk]
  • View 1M7X in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1M7X
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1M7X, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1m7xa1, region A:117-226 [Jmol] [rasmolscript] [script source]
        - Domain d1m7xa3, region A:227-622 [Jmol] [rasmolscript] [script source]
        - Domain d1m7xa2, region A:623-728 [Jmol] [rasmolscript] [script source]
        - Domain d1m7xb1, region B:117-226 [Jmol] [rasmolscript] [script source]
        - Domain d1m7xb3, region B:227-622 [Jmol] [rasmolscript] [script source]
        - Domain d1m7xb2, region B:623-728 [Jmol] [rasmolscript] [script source]
        - Domain d1m7xc1, region C:118-226 [Jmol] [rasmolscript] [script source]
        - Domain d1m7xc3, region C:227-622 [Jmol] [rasmolscript] [script source]
        - Domain d1m7xc2, region C:623-728 [Jmol] [rasmolscript] [script source]
        - Domain d1m7xd1, region D:117-226 [Jmol] [rasmolscript] [script source]
        - Domain d1m7xd3, region D:227-622 [Jmol] [rasmolscript] [script source]
        - Domain d1m7xd2, region D:623-728 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1m7x] [1m7x_B] [1m7x_A] [1m7x_C] [1m7x_D]
  • SWISS-PROT database: [P07762]
  • Domain organization of [GLGB_ECOLI] by SWISSPFAM
  • Domain found in 1M7X: [Aamy ] by SMART
  • Other resources with information on 1M7X
  • Community annotation for 1M7X at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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