1M7Y	Lyase	date	Jul 23, 2002
title	Crystal Structure Of Apple Acc Synthase In Complex With L- Aminoethoxyvinylglycine
authors	G.Capitani, D.Mccarthy, H.Gut, M.G.Gruetter, J.F.Kirsch
compound		source
Molecule: 1-Aminocyclopropane-1-Carboxylate Synthase Chain: A Fragment: Residues 1-435 Synonym: Acc Synthase Ec: 4.4.1.14 Engineered: Yes		Organism_scientific: Malus X Domestica Organism_taxid: 3750 Tissue: Fruit Cortical Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21 (De3)Plyss Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet19bv435stopacs
symmetry	Space Group: C 1 2 1	R_factor 0.205 R_Free 0.219
crystal cell	length a length b length c angle alpha angle beta angle gamma 103.310 61.140 77.140 90.00 123.36 90.00
method	X-Ray Diffraction	resolution	1.60 Å
ligand	MRD, PPG	enzyme	Lyase E.C.4.4.1.14 BRENDA
related structures	by homologous chain: 1M4N
Gene Ontology	Chain Function Process Component A 1-aminocyclopropane-1-carbox...
Primary reference	Apple 1-aminocyclopropane-1-carboxylate synthase in complex with the inhibitor L-aminoethoxyvinylglycine. Evidence for a ketimine intermediate., Capitani G, McCarthy DL, Gut H, Grutter MG, Kirsch JF, J Biol Chem 2002 Dec 20;277(51):49735-42. Epub 2002 Sep 11. PMID:12228256

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (79 Kb) [Save to disk] Biological Unit Coordinates (1m7y.pdb1.gz) 147 Kb LPC: Ligand-Protein Contacts for 1M7Y CSU: Contacts of Structural Units for 1M7Y Likely Quarternary Molecular Structure file(s) for 1M7Y Structure Factors (373 Kb) Retrieve 1M7Y in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1M7Y from S2C, [Save to disk] Re-refined 1m7y structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1M7Y in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1M7Y

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1M7Y, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1m7ya_, region A [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1m7y] [1m7y_A] SWISS-PROT database: [P37821] Domain organization of [1A1C_MALDO] by SWISSPFAM

Other resources with information on 1M7Y

Community annotation for 1M7Y at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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