1MAS Hydrolase date Dec 18, 1995
title Purine Nucleoside Hydrolase
authors M.Degano, D.N.Gopaul, G.Scapin, V.L.Schramm, J.C.Sacchettini
compound source
Molecule: Inosine-Uridine Nucleoside N-Ribohydrolase
Chain: A, B
Synonym: Purine Nucleoside Hydrolase, Inosine-Uridine Nucle Iu-Nh;
Ec: 3.2.2.1
Engineered: Yes
Mutation: Yes
Organism_scientific: Crithidia Fasciculata
Organism_taxid: 5656
Gene: Iu-Nh From C.Fasciculata
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_plasmid: Pet3d-Iunh
Expression_system_gene: Iu-Nh From C.Fasciculata
symmetry Space Group: P 21 21 2
R_factor 0.170 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
63.840 131.530 90.100 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.50 Å
ligand K enzyme Hydrolase E.C.3.2.2.1 BRENDA
related structures by homologous chain: 1EZR, 2MAS
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceThree-dimensional structure of the inosine-uridine nucleoside N-ribohydrolase from Crithidia fasciculata., Degano M, Gopaul DN, Scapin G, Schramm VL, Sacchettini JC, Biochemistry 1996 May 14;35(19):5971-81. PMID:8634238
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (99 Kb) [Save to disk]
  • Biological Unit Coordinates (1mas.pdb1.gz) 184 Kb
  • LPC: Ligand-Protein Contacts for 1MAS
  • CSU: Contacts of Structural Units for 1MAS
  • Likely Quarternary Molecular Structure file(s) for 1MAS
  • Retrieve 1MAS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1MAS from S2C, [Save to disk]
  • View 1MAS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1MAS
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1MAS, from MSDmotif at EBI
  • Genome occurence of 1MAS's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1masa_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1masb_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1mas_B] [1mas] [1mas_A]
  • SWISS-PROT database: [Q27546]
  • Domain organization of [IUNH_CRIFA] by SWISSPFAM
  • Other resources with information on 1MAS
  • Community annotation for 1MAS at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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