1MF0	Ligase	date	Aug 09, 2002
title	Structure Of The Recombinant Mouse-Muscle Adenylosuccinate S Complexed With Amp, Gdp, Hpo4(2-), And Mg(2+)
authors	C.V.Iancu, T.Borza, H.J.Fromm, R.B.Honzatko
compound		source
Molecule: Adenylosuccinate Synthetase Chain: A Synonym: Adss, Ampsase Ec: 6.3.4.4 Engineered: Yes		Organism_scientific: Mus Musculus Organism_common: House Mouse Organism_taxid: 10090 Gene: Adss1 Expression_system: Escherichia Coli Bl21 Expression_system_taxid: 511693 Expression_system_strain: Bl21 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet28b
symmetry	Space Group: P 43 21 2	R_factor 0.219 R_Free 0.292
crystal cell	length a length b length c angle alpha angle beta angle gamma 70.600 70.600 198.390 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.50 Å
ligand	AMP, GDP, MG, PO4	enzyme	Ligase E.C.6.3.4.4 BRENDA
related structures	by homologous chain: 1J4B, 1MF1
Gene Ontology	Chain Function Process Component A
Primary reference	Feedback inhibition and product complexes of recombinant mouse muscle adenylosuccinate synthetase., Iancu CV, Borza T, Fromm HJ, Honzatko RB, J Biol Chem 2002 Oct 25;277(43):40536-43. PMID:12186864

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (75 Kb) [Save to disk] Biological Unit Coordinates (1mf0.pdb1.gz) 138 Kb LPC: Ligand-Protein Contacts for 1MF0 CSU: Contacts of Structural Units for 1MF0 Likely Quarternary Molecular Structure file(s) for 1MF0 Structure Factors (156 Kb) Retrieve 1MF0 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1MF0 from S2C, [Save to disk] Re-refined 1mf0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1MF0 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1MF0

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1MF0, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1mf0a_, region A [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1mf0] [1mf0_A] SWISS-PROT database: [P28650] Domain organization of [PURA1_MOUSE] by SWISSPFAM Domain found in 1MF0: [Adenylsucc_synt ] by SMART

Other resources with information on 1MF0

Community annotation for 1MF0 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---