1MHY METHANE MONOOXYGENASE HYDROXYLASE date
authors Elango, N., Radhakrishnan, R., Froland, W.A., Waller, B.J., Earhart, C.A., Lipscomb, J.D., Ohlendorf, D.H.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.00
ligand FE enzyme
related structures by homologous chain: 1FZ7, 1MHZ, 1XVF
Gene
Ontology
ChainFunctionProcessComponent
B


D


G


Primary referenceCrystal structure of the hydroxylase component of methane monooxygenase from Methylosinus trichosporium OB3b., Elango N, Radhakrishnan R, Froland WA, Wallar BJ, Earhart CA, Lipscomb JD, Ohlendorf DH, Protein Sci 1997 Mar;6(3):556-68. PMID:9070438
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (247 Kb) [Save to disk]
  • Biological Unit Coordinates (1mhy.pdb1.gz) 480 Kb
  • LPC: Ligand-Protein Contacts for 1MHY
  • CSU: Contacts of Structural Units for 1MHY
  • Likely Quarternary Molecular Structure file(s) for 1MHY
  • Retrieve 1MHY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1MHY from S2C, [Save to disk]
  • View 1MHY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1MHY
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1MHY, from MSDmotif at EBI
  • Genome occurence of 1MHY's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1mhyb_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1mhyd_, region D [Jmol] [rasmolscript] [script source]
        - Domain d1mhyg_, region G [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1mhy_D] [1mhy_G] [1mhy] [1mhy_B]
  • SWISS-PROT database: [P27353] [P27354] [P27355]
  • Domain organization of [MEMA_METTR] [MEMB_METTR] [MEMG_METTR] by SWISSPFAM
  • Other resources with information on 1MHY
  • Community annotation for 1MHY at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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