1MMV Oxidoreductase date Sep 04, 2002
title Rat Neuronal Nos Heme Domain With Ng-Propyl-L-Arginine Bound
authors L.E.Bretscher, H.Li, T.L.Poulos, O.W.Griffith
compound source
Molecule: Nitric-Oxide Synthase, Brain
Chain: A, B
Fragment: Heme Domain
Synonym: Nos, Type I; Neuronal Nos; N-Nos; Nnos; Constituti Nc-Nos; Bnos; Nitric Oxidase Synthase;
Ec: 1.14.13.39
Engineered: Yes
Organism_scientific: Rattus Norvegicus
Organism_common: Norway Rat
Organism_taxid: 10116
Organ: Brain
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pcwori
symmetry Space Group: P 21 21 21
R_factor 0.225 R_Free 0.256
crystal
cell
length a length b length c angle alpha angle beta angle gamma
51.590 110.360 164.860 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand 3AR, ACT, H4B, HEM, ZN BindingDB enzyme Oxidoreductase E.C.1.14.13.39 BRENDA
related structures by homologous chain: 1FOO, 1P6J
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructural characterization and kinetics of nitric-oxide synthase inhibition by novel N5-(iminoalkyl)- and N5-(iminoalkenyl)-ornithines., Bretscher LE, Li H, Poulos TL, Griffith OW, J Biol Chem 2003 Nov 21;278(47):46789-97. Epub 2003 Sep 05. PMID:12960153
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (154 Kb) [Save to disk]
  • Biological Unit Coordinates (1mmv.pdb1.gz) 148 Kb
  • LPC: Ligand-Protein Contacts for 1MMV
  • CSU: Contacts of Structural Units for 1MMV
  • Likely Quarternary Molecular Structure file(s) for 1MMV
  • Structure Factors (523 Kb)
  • Retrieve 1MMV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1MMV from S2C, [Save to disk]
  • Re-refined 1mmv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1MMV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1MMV
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1MMV, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1mmva_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1mmvb_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1mmv_B] [1mmv] [1mmv_A]
  • SWISS-PROT database: [P29476]
  • Domain organization of [NOS1_RAT] by SWISSPFAM
  • Other resources with information on 1MMV
  • Community annotation for 1MMV at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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