1MN1 Peroxidase date Apr 26, 1997
title Manganese Peroxidase Substrate Binding Site Mutant D179n
authors M.Sundaramoorthy, T.L.Poulos
compound source
Molecule: Manganese Peroxidase
Chain: A
Ec: 1.11.1.13
Engineered: Yes
Mutation: Yes
Organism_scientific: Phanerochaete Chrysosporium
Organism_taxid: 5306
Strain: Ogc101
Variant: Ogc107-1
Cellular_location: Extracellular
Gene: Mnp1
Expression_system: Phanerochaete Chrysosporium
Expression_system_taxid: 5306
Expression_system_strain: Ogc107-1 (Ade1)
Expression_system_variant: D179n-6
Expression_system_plasmid: Puc18
Expression_system_gene: Mnp1
Other_details: Wood-Rotting Fungus
symmetry Space Group: C 1 2 1
R_factor 0.187 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
163.240 45.970 53.570 90.00 97.16 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand CA, HEM, NAG enzyme Oxidoreductase E.C.1.11.1.13 BRENDA
related structures by homologous chain: 1MN2, 1MNP
Gene
Ontology
ChainFunctionProcessComponent
A
  • peroxidase activity
  • manganese peroxidase activit...


  • Primary referenceCrystal structures of substrate binding site mutants of manganese peroxidase., Sundaramoorthy M, Kishi K, Gold MH, Poulos TL, J Biol Chem 1997 Jul 11;272(28):17574-80. PMID:9211904
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (64 Kb) [Save to disk]
  • Biological Unit Coordinates (1mn1.pdb1.gz) 59 Kb
  • LPC: Ligand-Protein Contacts for 1MN1
  • CSU: Contacts of Structural Units for 1MN1
  • Likely Quarternary Molecular Structure file(s) for 1MN1
  • Structure Factors (230 Kb)
  • Retrieve 1MN1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1MN1 from S2C, [Save to disk]
  • Re-refined 1mn1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1MN1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1MN1
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1MN1, from MSDmotif at EBI
  • Genome occurence of 1MN1's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1mn1__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1mn1] [1mn1_A]
  • SWISS-PROT database: [Q02567]
  • Domain organization of [PEM1_PHACH] by SWISSPFAM
  • Other resources with information on 1MN1
  • Community annotation for 1MN1 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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