1MN8 Viral Protein date Sep 05, 2002
title Structure Of Moloney Murine Leukaemia Virus Matrix Protein
authors N.Riffel, K.Harlos, O.Iourin, Z.Rao, A.Kingsman, D.Stuart, E.Fry
compound source
Molecule: Core Protein P15
Chain: A, B, C, D
Fragment: M-Mulv C-Terminally Truncated
Synonym: M-Mulv Matrix Protein P15
Engineered: Yes
 Organism_scientific: Moloney Murine Leukemia Virus
Organism_taxid: 11801
Gene: P15
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21 (D3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet32a
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
33.800 49.500 50.800 71.90 81.90 80.00
method X-Ray Diffractionresolution 1.00 Å
note 1MN8 is a representative structure
Primary referenceAtomic resolution structure of Moloney murine leukemia virus matrix protein and its relationship to other retroviral matrix proteins., Riffel N, Harlos K, Iourin O, Rao Z, Kingsman A, Stuart D, Fry E, Structure (Camb) 2002 Dec;10(12):1627-36. PMID:12467570
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (79 Kb) [Save to disk]
  • Biological Unit Coordinates (1mn8.pdb1.gz) 20 Kb
  • Biological Unit Coordinates (1mn8.pdb2.gz) 19 Kb
  • Biological Unit Coordinates (1mn8.pdb3.gz) 19 Kb
  • Biological Unit Coordinates (1mn8.pdb4.gz) 20 Kb
  • CSU: Contacts of Structural Units for 1MN8
  • Likely Quarternary Molecular Structure file(s) for 1MN8
  • Structure Factors (1305 Kb)
  • Retrieve 1MN8 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1MN8 from S2C, [Save to disk]
  • Re-refined 1mn8 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1MN8 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1MN8
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Conformational Epitope Prediction for 1MN8 1MN8A 1MN8B 1MN8C 1MN8D from the CEP Server.
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1MN8, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1mn8a_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1mn8b_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1mn8c_, region C [Jmol] [rasmolscript] [script source]
        - Domain d1mn8d_, region D [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1mn8_C] [1mn8] [1mn8_A] [1mn8_D] [1mn8_B]
  • SWISS-PROT database: [P03332]
  • Domain organization of [GAG_MLVMO] by SWISSPFAM
    • Other resources with information on 1MN8
  • Community annotation for 1MN8 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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