1MO0	Isomerase	date	Sep 06, 2002
title	Structural Genomics Of Caenorhabditis Elegans: Triose Phosph Isomerase
authors	J.Symersky, S.Li, J.Finley, Z.J.Liu, H.Qui, C.H.Luan, M.Carson, J. D.Johnson, G.Lin, J.Zhao, W.Thomas, L.A.Nagy, B.Sha, L.J.Delucas, C.Wang, M.Luo, Southeast Collaboratory For Structural Genomic
compound		source
Molecule: Triosephosphate Isomerase Chain: A, B Synonym: Tim Ec: 5.3.1.1 Engineered: Yes		Organism_scientific: Caenorhabditis Elegans Organism_taxid: 6239 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pdest 17.1
symmetry	Space Group: P 1 21 1	R_factor 0.183 R_Free 0.213
crystal cell	length a length b length c angle alpha angle beta angle gamma 36.399 64.373 105.706 90.00 91.53 90.00
method	X-Ray Diffraction	resolution	1.70 Å
ligand	ACT, SO4	enzyme	Isomerase E.C.5.3.1.1 BRENDA
related structures	by homologous chain: 1R2R, 1SW0
Gene Ontology	Chain Function Process Component A, B
Primary reference	Structural genomics of Caenorhabditis elegans: triosephosphate isomerase., Symersky J, Li S, Carson M, Luo M, Proteins 2003 May 15;51(3):484-6. PMID:12696058

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (89 Kb) [Save to disk] Biological Unit Coordinates (1mo0.pdb1.gz) 85 Kb LPC: Ligand-Protein Contacts for 1MO0 CSU: Contacts of Structural Units for 1MO0 Likely Quarternary Molecular Structure file(s) for 1MO0 Structure Factors (396 Kb) Retrieve 1MO0 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1MO0 from S2C, [Save to disk] Re-refined 1mo0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1MO0 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1MO0

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1MO0, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1mo0a_, region A [Jmol] [rasmolscript] [script source]     - Domain d1mo0b_, region B [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1mo0_B] [1mo0] [1mo0_A] SWISS-PROT database: [Q10657] Domain organization of [TPIS_CAEEL] by SWISSPFAM

Other resources with information on 1MO0

Community annotation for 1MO0 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

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