1MR0 Signaling Protein date Sep 17, 2002
title Solution Nmr Structure Of Agrp(87-120; C105a)
authors P.J.Jackson, J.C.Mcnulty, Y.K.Yang, D.A.Thompson, B.Chai, I.Gantz G.S.Barsh, G.M.Millhauser
compound source
Molecule: Agouti Related Protein
Chain: A
Fragment: Residues 87-120
Engineered: Yes
Mutation: Yes
Other_details: This Is A Rationally Minimized Fragment Of T Active C-Terminal Domain Of The Human Agouti-Related Protei 132). This Fragment Has Removed From It The Largely Disorde Terminal 12 Residues, Yet Retains The Same Basic Structural Functional Characteristics Of The Larger Fragment.
 Synthetic: Yes
Other_details: The Protein Was Chemically Synthesized. The Of The Protein Is Naturally Found In Homo Sapiens. The Synt Method Is Standard Solid-Phase Synthesis Followed By Aqueou Oxidative Folding.
methodSolution NMR
note 1MR0 supersedes 1MC6
related structures by homologous chain: 1HYK
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceDesign, pharmacology, and NMR structure of a minimized cystine knot with agouti-related protein activity., Jackson PJ, McNulty JC, Yang YK, Thompson DA, Chai B, Gantz I, Barsh GS, Millhauser GL, Biochemistry. 2002 Jun 18;41(24):7565-72. PMID:12056887
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (340 Kb) [Save to disk]
  • Biological Unit Coordinates (1mr0.pdb1.gz) 9 Kb
  • CSU: Contacts of Structural Units for 1MR0
  • Retrieve 1MR0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1MR0 from S2C, [Save to disk]
    • View 1MR0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1MR0
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1MR0, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1mr0a_, region A [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1mr0_A] [1mr0]
  • SWISS-PROT database: [O00253]
  • Domain organization of [AGRP_HUMAN] by SWISSPFAM
    • Other resources with information on 1MR0
  • Community annotation for 1MR0 at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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