1MR6 Toxin date Sep 18, 2002
title Solution Structure Of Gamma-Bungarotoxin:Implication For The The Residues Adjacent To Rgd In Integrin Binding
authors W.J.Chuang, J.H.Shiu, C.Y.Chen, Y.C.Chen, L.S.Chang
compound source
Molecule: Neurotoxin
Chain: A
Synonym: Gamma-Bungarotoxin
 Organism_scientific: Bungarus Multicinctus
Organism_common: Many-Banded Krait
Organism_taxid: 8616
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A
  • toxin activity


    • Primary referenceSolution structure of gamma-bungarotoxin: The functional significance of amino acid residues flanking the RGD motif in integrin binding., Shiu JH, Chen CY, Chang LS, Chen YC, Chen YC, Lo YH, Liu YC, Chuang WJ, Proteins 2004 Aug 18;57(4):839-849. PMID:15390258
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (340 Kb) [Save to disk]
  • Biological Unit Coordinates (1mr6.pdb1.gz) 17 Kb
  • CSU: Contacts of Structural Units for 1MR6
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1MR6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1MR6 from S2C, [Save to disk]
    • View 1MR6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1MR6
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1MR6, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1mr6a_, region A [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1mr6_A] [1mr6]
  • SWISS-PROT database: [Q9YGJ0]
  • Domain organization of [NXLHI_BUNMU] by SWISSPFAM
    • Other resources with information on 1MR6
  • Community annotation for 1MR6 at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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