1MVY Transferase date Sep 27, 2002
title Amylosucrase Mutant E328q Co-Crystallized With Maltoheptaose
authors L.K.Skov, O.Mirza, D.Sprogoe, I.Dar, M.Remaud-Simeon, C.Albenne, P M.Gajhede
compound source
Molecule: Amylosucrase
Chain: A
Ec: 2.4.1.4
Engineered: Yes
Mutation: Yes
Organism_scientific: Neisseria Polysaccharea
Organism_taxid: 489
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 2
R_factor 0.181 R_Free 0.217
crystal
cell
length a length b length c angle alpha angle beta angle gamma
96.028 116.358 60.303 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand GLC, TRS enzyme Transferase E.C.2.4.1.4 BRENDA
related structures by homologous chain: 1JG9, 1JGI
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceOligosaccharide and sucrose complexes of amylosucrase. Structural implications for the polymerase activity., Skov LK, Mirza O, Sprogoe D, Dar I, Remaud-Simeon M, Albenne C, Monsan P, Gajhede M, J Biol Chem 2002 Dec 6;277(49):47741-7. Epub 2002 Oct 2. PMID:12364331
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (116 Kb) [Save to disk]
  • Biological Unit Coordinates (1mvy.pdb1.gz) 110 Kb
  • LPC: Ligand-Protein Contacts for 1MVY
  • CSU: Contacts of Structural Units for 1MVY
  • Likely Quarternary Molecular Structure file(s) for 1MVY
  • Retrieve 1MVY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1MVY from S2C, [Save to disk]
  • View 1MVY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1MVY
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1MVY, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1mvya2, region A:1-554 [Jmol] [rasmolscript] [script source]
        - Domain d1mvya1, region A:555-628 [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1mvy] [1mvy_A]
  • SWISS-PROT database: [Q9ZEU2]
  • Domain organization of [AMYS_NEIPO] by SWISSPFAM
  • Domain found in 1MVY: [Aamy ] by SMART
  • Other resources with information on 1MVY
  • Community annotation for 1MVY at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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