1N05 Transferase date Oct 11, 2002
title Crystal Structure Of Schizosaccharomyces Pombe Riboflavin Ki Reveals A Novel Atp And Riboflavin Binding Fold
authors S.Bauer, K.Kemter, A.Bacher, R.Huber, M.Fischer, S.Steinbacher
compound source
Molecule: Putative Riboflavin Kinase
Chain: A
Ec: 2.7.1.26
Engineered: Yes
Organism_scientific: Schizosaccharomyces Pombe
Organism_common: Fission Yeast
Organism_taxid: 4896
Gene: Spcc18.16c
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pnco
symmetry Space Group: P 61 2 2
R_factor 0.221 R_Free 0.267
crystal
cell
length a length b length c angle alpha angle beta angle gamma
69.497 69.497 139.851 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.10 Å
ligand
enzyme Transferase E.C.2.7.1.26 BRENDA
related structures by homologous chain: 1N06, 1N07
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structure of Schizosaccharomyces pombe riboflavin kinase reveals a novel ATP and riboflavin-binding fold., Bauer S, Kemter K, Bacher A, Huber R, Fischer M, Steinbacher S, J Mol Biol 2003 Mar 7;326(5):1463-73. PMID:12595258
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (30 Kb) [Save to disk]
  • Biological Unit Coordinates (1n05.pdb1.gz) 26 Kb
  • CSU: Contacts of Structural Units for 1N05
  • Likely Quarternary Molecular Structure file(s) for 1N05
  • Structure Factors (95 Kb)
  • Retrieve 1N05 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1N05 from S2C, [Save to disk]
  • Re-refined 1n05 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1N05 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1N05
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1N05, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1n05a_, region A [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1n05_A] [1n05]
  • SWISS-PROT database: [O74866]
  • Domain organization of [RIFK_SCHPO] by SWISSPFAM
  • Domain found in 1N05: [Flavokinase ] by SMART
  • Other resources with information on 1N05
  • Community annotation for 1N05 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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