1N1N Dna date Oct 18, 2002
title Structure Of Mispairing Of The Deoxycytosine With Deoxyadeno The 8,9-Dihydro-8-(N7-Guanyl)-9-Hydroxy-Aflatoxin B1 Adduct
authors M.P.Stone, I.Giri
compound source
Molecule: 5'-D(Apcpaptpcpgpaptpcpt)-3'
Chain: A
Engineered: Yes
 Synthetic: Yes
Other_details: Engineered Synthetic Oligo Nulceotide

Molecule: 5'-D(Apgpaptpcpapaptpgpt)-3'
Chain: B
Engineered: Yes
Synthetic: Yes
Other_details: Synthetic Oligo Nulceotide
methodSolution NMR
ligand AFN enzyme
Primary referenceWobble dC.dA pairing 5' to the cationic guanine N7 8,9-dihydro-8-(N7-guanyl)-9-hydroxyaflatoxin B1 adduct: implications for nontargeted AFB1 mutagenesis., Giri I, Stone MP, Biochemistry 2003 Jun 17;42(23):7023-34. PMID:12795597
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (15 Kb) [Save to disk]
  • Biological Unit Coordinates (1n1n.pdb1.gz) 11 Kb
  • LPC: Ligand-Protein Contacts for 1N1N
  • CSU: Contacts of Structural Units for 1N1N
  • Retrieve 1N1N in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1N1N from S2C, [Save to disk]
    • View 1N1N in 3D
  • Proteopedia, because life has more than 2D.
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  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1N1N
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1N1N, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1n1n_B] [1n1n] [1n1n_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 1N1N
  • Community annotation for 1N1N at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
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