1N8V Lipid Binding Protein date Nov 21, 2002
title Chemosensory Protein In Complex With Bromo-Dodecanol
authors V.Campanacci, A.Lartigue, B.M.Hallberg, T.A.Jones, M.T.Giudici-O M.Tegoni, C.Cambillau
compound source
Molecule: Chemosensory Protein
Chain: A, B
Engineered: Yes
Organism_scientific: Mamestra Brassicae
Organism_common: Cabbage Moth
Organism_taxid: 55057
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21-De3
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet-22b+
symmetry Space Group: P 1 21 1
R_factor 0.180 R_Free 0.202
crystal
cell
length a length b length c angle alpha angle beta angle gamma
33.460 54.180 56.380 90.00 93.88 90.00
method X-Ray Diffractionresolution 1.39 Å
ligand BDD enzyme
related structures by homologous chain: 1KX9
Primary referenceMoth chemosensory protein exhibits drastic conformational changes and cooperativity on ligand binding., Campanacci V, Lartigue A, Hallberg BM, Jones TA, Giudici-Orticoni MT, Tegoni M, Cambillau C, Proc Natl Acad Sci U S A 2003 Apr 29;100(9):5069-74. Epub 2003 Apr 15. PMID:12697900
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (49 Kb) [Save to disk]
  • Biological Unit Coordinates (1n8v.pdb1.gz) 22 Kb
  • Biological Unit Coordinates (1n8v.pdb2.gz) 23 Kb
  • LPC: Ligand-Protein Contacts for 1N8V
  • CSU: Contacts of Structural Units for 1N8V
  • Likely Quarternary Molecular Structure file(s) for 1N8V
  • Structure Factors (287 Kb)
  • Retrieve 1N8V in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1N8V from S2C, [Save to disk]
  • Re-refined 1n8v structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1N8V in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1N8V
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Conformational Epitope Prediction for 1N8V 1N8VA 1N8VB from the CEP Server.
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1N8V, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1n8va_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1n8vb_, region B [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1n8v] [1n8v_A] [1n8v_B]
  • SWISS-PROT database: [Q9NG96]
  • Domain organization of [Q9NG96_MAMBR] by SWISSPFAM
  • Other resources with information on 1N8V
  • Community annotation for 1N8V at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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