1NH7 Transferase date Dec 18, 2002
title Atp Phosphoribosyltransferase (Atp-Prtase) From Mycobacteriu Tuberculosis
authors Y.Cho, V.Sharma, J.C.Sacchettini, Tb Structural Genomics Consor (Tbsgc)
compound source
Molecule: Atp Phosphoribosyltransferase
Chain: A
Ec: 2.4.2.17
Engineered: Yes
Organism_scientific: Mycobacterium Tuberculosis H37rv
Organism_taxid: 83332
Strain: H37rv
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21 (De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28a
symmetry Space Group: H 3 2
R_factor 0.192 R_Free 0.261
crystal
cell
length a length b length c angle alpha angle beta angle gamma
132.540 132.540 110.500 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.70 Å
ligand MG, SO4 enzyme Transferase E.C.2.4.2.17 BRENDA
related structures by homologous chain: 1NH8
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structure of ATP phosphoribosyltransferase from Mycobacterium tuberculosis., Cho Y, Sharma V, Sacchettini JC, J Biol Chem 2003 Mar 7;278(10):8333-9. Epub 2003 Jan 2. PMID:12511575
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (55 Kb) [Save to disk]
  • Biological Unit Coordinates (1nh7.pdb1.gz) 92 Kb
  • Biological Unit Coordinates (1nh7.pdb2.gz) 272 Kb
  • LPC: Ligand-Protein Contacts for 1NH7
  • CSU: Contacts of Structural Units for 1NH7
  • Likely Quarternary Molecular Structure file(s) for 1NH7
  • Retrieve 1NH7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1NH7 from S2C, [Save to disk]
  • View 1NH7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1NH7
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1NH7, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1nh7a1, region A:1-210 [Jmol] [rasmolscript] [script source]
        - Domain d1nh7a2, region A:211-284 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1nh7] [1nh7_A]
  • SWISS-PROT database: [P60759]
  • Domain organization of [HIS1_MYCTU] by SWISSPFAM
  • Other resources with information on 1NH7
  • Community annotation for 1NH7 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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