1NLM	Transferase	date	Jan 07, 2003
title	Crystal Structure Of Murg:Glcnac Complex
authors	Y.Hu, L.Chen, S.Ha, B.Gross, B.Falcone, D.Walker, M.Mokhtarzadeh, S
compound		source
Molecule: Udp-N-Acetylglucosamine--N-Acetylmuramyl-(Pentape Pyrophosphoryl-Undecaprenol N-Acetylglucosamine Transferase Chain: A, B Synonym: Pentapeptide, Pyrophosphoryl-Undecaprenol N- Acetylglucosamine Transferase Ec 2.4.1.-, Undecaprenyl-Pp-M Pentapeptide-Udpglcnac Glcnac Transferase; Ec: 2.4.1.- Engineered: Yes		Organism_scientific: Escherichia Coli Organism_taxid: 562 Gene: Murg Or B0090 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet21b
symmetry	Space Group: P 21 21 21	R_factor 0.226 R_Free 0.283
crystal cell	length a length b length c angle alpha angle beta angle gamma 66.703 83.651 146.245 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.50 Å
ligand	GOL, UD1	enzyme	Transferase E.C.2.4.1 BRENDA
related structures	by homologous chain: 1F0K
Gene Ontology	Chain Function Process Component A, B
Primary reference	Crystal structure of the MurG:UDP-GlcNAc complex reveals common structural principles of a superfamily of glycosyltransferases., Hu Y, Chen L, Ha S, Gross B, Falcone B, Walker D, Mokhtarzadeh M, Walker S, Proc Natl Acad Sci U S A 2003 Feb 4;100(3):845-9. PMID:12538870

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (114 Kb) [Save to disk] Biological Unit Coordinates (1nlm.pdb1.gz) 109 Kb LPC: Ligand-Protein Contacts for 1NLM CSU: Contacts of Structural Units for 1NLM Likely Quarternary Molecular Structure file(s) for 1NLM Retrieve 1NLM in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1NLM from S2C, [Save to disk]

View 1NLM in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1NLM

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1NLM, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1nlma_, region A [Jmol] [rasmolscript] [script source]     - Domain d1nlmb_, region B [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1nlm] [1nlm_B] [1nlm_A] SWISS-PROT database: [P17443] Domain organization of [MURG_ECOLI] by SWISSPFAM

Other resources with information on 1NLM

Community annotation for 1NLM at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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