1NQY	Hydrolase	date	Jan 23, 2003
title	The Structure Of A Coa Pyrophosphatase From D. Radiodurans
authors	L.W.Kang, S.B.Gabelli, M.A.Bianchet, W.L.Xu, M.J.Bessman, L.M.Amz
compound		source
Molecule: Coa Pyrophosphatase (Muttnudix Family Protein) Chain: A Ec: 3.6.1.9 Engineered: Yes		Organism_scientific: Deinococcus Radiodurans Organism_taxid: 1299 Gene: Dr1184 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_plasmid: Pet24a(+)
symmetry	Space Group: P 21 21 2	R_factor 0.200 R_Free 0.279
crystal cell	length a length b length c angle alpha angle beta angle gamma 40.610 94.185 43.908 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.09 Å
ligand		enzyme	Hydrolase E.C.3.6.1.9 BRENDA
related structures	by homologous chain: 1NQZ
Gene Ontology	Chain Function Process Component A
Primary reference	Structure of a coenzyme A pyrophosphatase from Deinococcus radiodurans: a member of the Nudix family., Kang LW, Gabelli SB, Bianchet MA, Xu WL, Bessman MJ, Amzel LM, J Bacteriol 2003 Jul;185(14):4110-8. PMID:12837785

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (32 Kb) [Save to disk] Biological Unit Coordinates (1nqy.pdb1.gz) 28 Kb CSU: Contacts of Structural Units for 1NQY Likely Quarternary Molecular Structure file(s) for 1NQY Retrieve 1NQY in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1NQY from S2C, [Save to disk]

View 1NQY in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1NQY

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1NQY, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1nqya_, region A [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1nqy] [1nqy_A] SWISS-PROT database: [Q9RV46] Domain organization of [Q9RV46_DEIRA] by SWISSPFAM

Other resources with information on 1NQY

Community annotation for 1NQY at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---