1NUO Hormone Growth Factor Receptor date Jan 31, 2003
title Two Rth Mutants With Impaired Hormone Binding
authors B.R.Huber, B.Sandler, B.L.West, S.T.Cunha-Lima, H.T.Nguyen, J.W.A J.D.Baxter, R.J.Fletterick
compound source
Molecule: Thyroid Hormone Receptor Beta-1
Chain: A
Fragment: Ligand Binding Domain
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Thrb Or Nr1a2 Or Erba2 Or Thr1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21 De3 Plyss
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28a
symmetry Space Group: P 31 2 1
R_factor 0.252 R_Free 0.302
crystal
cell
length a length b length c angle alpha angle beta angle gamma
67.274 67.274 130.121 90.00 90.00 120.00
method X-Ray Diffractionresolution 3.10 Å
ligand 4HY BindingDB enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceTwo resistance to thyroid hormone mutants with impaired hormone binding., Huber BR, Sandler B, West BL, Cunha Lima ST, Nguyen HT, Apriletti JW, Baxter JD, Fletterick RJ, Mol Endocrinol 2003 Apr;17(4):643-52. Epub 2003 Jan 16. PMID:12554782
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (44 Kb) [Save to disk]
  • Biological Unit Coordinates (1nuo.pdb1.gz) 39 Kb
  • LPC: Ligand-Protein Contacts for 1NUO
  • CSU: Contacts of Structural Units for 1NUO
  • Likely Quarternary Molecular Structure file(s) for 1NUO
  • Retrieve 1NUO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1NUO from S2C, [Save to disk]
  • View 1NUO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1NUO
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1NUO, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1nuoa_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1nuo] [1nuo_A]
  • SWISS-PROT database: [P10828]
  • Domain organization of [THB_HUMAN] by SWISSPFAM
  • Domain found in 1NUO: [HOLI ] by SMART
  • Other resources with information on 1NUO
  • Community annotation for 1NUO at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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