1O6T	Cell Invasion	date	Oct 15, 2002
title	Internalin (Inla, Listeria Monocytogenes) - Functional Domai Uncomplexed
authors	W.D.Schubert, C.Urbanke, T.Ziehm, V.Beier, M.P.Machner, E.Domann J.Wehland, T.Chakraborty, D.W.Heinz
compound		source
Molecule: Internalin A Chain: A Fragment: Functional Domain, Residues 36-496 Engineered: Yes		Organism_scientific: Listeria Monocytogenes Organism_taxid: 169963 Strain: Egd-E Variant: Serovar 12a Atcc: Dsmz 20600 Expression_system: Escherichia Coli Expression_system_taxid: 511693 Expression_system_strain: Bl21 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pgex-6p-1
symmetry	Space Group: C 1 2 1	R_factor 0.131 R_Free 0.161
crystal cell	length a length b length c angle alpha angle beta angle gamma 95.919 55.881 97.780 90.00 113.07 90.00
method	X-Ray Diffraction	resolution	1.60 Å
ligand	CA, CL, MES, MG, SO4	enzyme
related structures	by homologous chain: 1O6S, 1O6V
Primary reference	Structure of internalin, a major invasion protein of Listeria monocytogenes, in complex with its human receptor E-cadherin., Schubert WD, Urbanke C, Ziehm T, Beier V, Machner MP, Domann E, Wehland J, Chakraborty T, Heinz DW, Cell 2002 Dec 13;111(6):825-36. PMID:12526809

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (111 Kb) [Save to disk] Biological Unit Coordinates (1o6t.pdb1.gz) 205 Kb LPC: Ligand-Protein Contacts for 1O6T CSU: Contacts of Structural Units for 1O6T Likely Quarternary Molecular Structure file(s) for 1O6T Structure Factors (842 Kb) Retrieve 1O6T in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1O6T from S2C, [Save to disk] Re-refined 1o6t structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1O6T in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1O6T

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1O6T, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1o6ta2, region A:35-416 [Jmol] [rasmolscript] [script source]     - Domain d1o6ta1, region A:417-496 [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1o6t_A] [1o6t] SWISS-PROT database: [P25146] Domain organization of [INLA_LISMO] by SWISSPFAM Domain found in 1O6T: [LRR ] by SMART

Other resources with information on 1O6T

Community annotation for 1O6T at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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