1O77 Immune System Membrane Protein date Oct 24, 2002
title Crystal Structure Of The C713s Mutant Of The Tir Domain Of H
authors X.Tao, Y.Xu, Z.Ye, A.A.Beg, L.Tong
compound source
Molecule: Toll-Like Receptor 2
Chain: A, B, C, D, E
Fragment: Tir Domain, Residues 639-784
Synonym: Tollinterleukin 1 Receptor-Like Protein 4, Tlr2,
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector: Pet
symmetry Space Group: P 65 2 2
R_factor 0.249 R_Free 0.315
crystal
cell
length a length b length c angle alpha angle beta angle gamma
112.300 112.300 362.800 90.00 90.00 120.00
method X-Ray Diffractionresolution 3.20 Å
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, E, B


Primary referenceAn extensively associated dimer in the structure of the C713S mutant of the TIR domain of human TLR2., Tao X, Xu Y, Zheng Y, Beg AA, Tong L, Biochem Biophys Res Commun 2002 Nov 29;299(2):216-21. PMID:12437972
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (121 Kb) [Save to disk]
  • Biological Unit Coordinates (1o77.pdb1.gz) 93 Kb
  • Biological Unit Coordinates (1o77.pdb2.gz) 25 Kb
  • CSU: Contacts of Structural Units for 1O77
  • Likely Quarternary Molecular Structure file(s) for 1O77
  • Retrieve 1O77 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1O77 from S2C, [Save to disk]
  • View 1O77 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1O77
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1O77, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1o77a_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1o77b_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1o77c_, region C [Jmol] [rasmolscript] [script source]
        - Domain d1o77d_, region D [Jmol] [rasmolscript] [script source]
        - Domain d1o77e_, region E [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1o77_A] [1o77_E] [1o77] [1o77_C] [1o77_D] [1o77_B]
  • SWISS-PROT database: [O60603]
  • Domain organization of [TLR2_HUMAN] by SWISSPFAM
  • Domain found in 1O77: [TIR ] by SMART
  • Other resources with information on 1O77
  • Community annotation for 1O77 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science