1O96 Electron Transfer date Dec 11, 2002
title Structure Of Electron Transferring Flavoprotein For Methylophilus Methylotrophus.
authors D.Leys, J.Basran, F.Talfournier, M.J.Sutcliffe, N.S.Scrutton
compound source
Molecule: Electron Transferring Flavoprotein Beta-Subunit
Chain: A, C, E, Q
Synonym: Beta-Etf, Electron Transfer Flavoprotein Small Subunit, Etfss;
Engineered: Yes
Organism_scientific: Methylophilus Methylotrophus
Organism_taxid: 17
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Electron Transferring Flavoprotein Alpha-Subunit
Chain: B, D, F, Z
Synonym: Alpha-Etf, Electron Transfer Flavoprotein Large Subunit, Etfls;
Engineered: Yes

Organism_scientific: Methylophilus Methylotrophus
Organism_taxid: 17
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 21
R_factor 0.212 R_Free 0.278
crystal
cell
length a length b length c angle alpha angle beta angle gamma
117.516 126.877 221.390 90.00 90.00 90.00
method X-Ray Diffractionresolution 3.1 Å
ligand AMP, FAD enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, E, Q, C
  • electron transfer activity


  • F, B, Z, D
  • electron transfer activity


  • Primary referenceExtensive conformational sampling in a ternary electron transfer complex., Leys D, Basran J, Talfournier F, Sutcliffe MJ, Scrutton NS, Nat Struct Biol. 2003 Mar;10(3):219-25. PMID:12567183
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (358 Kb) [Save to disk]
  • Biological Unit Coordinates (1o96.pdb1.gz) 93 Kb
  • Biological Unit Coordinates (1o96.pdb2.gz) 92 Kb
  • Biological Unit Coordinates (1o96.pdb3.gz) 92 Kb
  • Biological Unit Coordinates (1o96.pdb4.gz) 89 Kb
  • LPC: Ligand-Protein Contacts for 1O96
  • CSU: Contacts of Structural Units for 1O96
  • Likely Quarternary Molecular Structure file(s) for 1O96
  • Structure Factors (451 Kb)
  • Retrieve 1O96 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1O96 from S2C, [Save to disk]
  • Re-refined 1o96 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1O96 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1O96
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1O96, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1o96a_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1o96b1, region B:1-191 [Jmol] [rasmolscript] [script source]
        - Domain d1o96b2, region B:196-318 [Jmol] [rasmolscript] [script source]
        - Domain d1o96c_, region C [Jmol] [rasmolscript] [script source]
        - Domain d1o96d1, region D:1-191 [Jmol] [rasmolscript] [script source]
        - Domain d1o96d2, region D:196-318 [Jmol] [rasmolscript] [script source]
        - Domain d1o96e_, region E [Jmol] [rasmolscript] [script source]
        - Domain d1o96f1, region F:1-191 [Jmol] [rasmolscript] [script source]
        - Domain d1o96f2, region F:196-318 [Jmol] [rasmolscript] [script source]
        - Domain d1o96q_, region Q [Jmol] [rasmolscript] [script source]
        - Domain d1o96z1, region Z:1-189 [Jmol] [rasmolscript] [script source]
        - Domain d1o96z2, region Z:196-318 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1o96_E] [1o96] [1o96_F] [1o96_D] [1o96_B] [1o96_Z] [1o96_Q] [1o96_C] [1o96_A]
  • SWISS-PROT database: [P53571] [P53570]
  • Domain organization of [ETFA_METME] [ETFB_METME] by SWISSPFAM
  • Domain found in 1O96: [ETF ] by SMART
  • Other resources with information on 1O96
  • Community annotation for 1O96 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science