1OA0 REDUCED HYBRID CLUSTER PROTEIN FROM DESULFOVIBRIO DESULFURICANS X-RAY STRUCTURE AT 1.25A RESOLUTION date
authors Macedo, S., Aragao, D., Mitchell, E.P., Romao, C.V., Liu, M.Y., Frazao, C., Saraiva, L.M., Xavier, A.V., Legall, J., Dongen, W.M.A.M.Van., Hagen, W.R., Teixeira, M., Carrondo, M.A., Lindley, P.F.
compound source
symmetry
R_factor
R_Free 0.15036
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.25
ligand MES, SF3, SF4 enzyme
related structures by homologous chain: 1GNL, 1UPX
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceReduced hybrid cluster proteins (HCP) from Desulfovibrio desulfuricans ATCC 27774 and Desulfovibrio vulgaris (Hildenborough): X-ray structures at high resolution using synchrotron radiation., Aragao D, Macedo S, Mitchell EP, Romao CV, Liu MY, Frazao C, Saraiva LM, Xavier AV, LeGall J, van Dongen WM, Hagen WR, Teixeira M, Carrondo MA, Lindley P, J Biol Inorg Chem 2003 May;8(5):540-8. Epub 2003 Feb 15. PMID:12764602
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (214 Kb) [Save to disk]
  • Biological Unit Coordinates (1oa0.pdb1.gz) 106 Kb
  • Biological Unit Coordinates (1oa0.pdb2.gz) 105 Kb
  • LPC: Ligand-Protein Contacts for 1OA0
  • CSU: Contacts of Structural Units for 1OA0
  • Likely Quarternary Molecular Structure file(s) for 1OA0
  • Structure Factors (3952 Kb)
  • Retrieve 1OA0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1OA0 from S2C, [Save to disk]
  • Re-refined 1oa0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1OA0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1OA0
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Conformational Epitope Prediction for 1OA0 1OA0A 1OA0B from the CEP Server.
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1OA0, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1oa0a_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1oa0b_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1oa0_A] [1oa0] [1oa0_B]
  • SWISS-PROT database: [Q01770]
  • Domain organization of [HCP_DESDA] by SWISSPFAM
  • Other resources with information on 1OA0
  • Community annotation for 1OA0 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science