1OAF	Oxidoreductase	date	Jan 13, 2003
title	Ascobate Peroxidase From Soybean Cytosol In Complex With Asc
authors	K.H.Sharp, E.L.Raven, P.C.E.Moody
compound		source
Molecule: Ascorbate Peroxidase Chain: A Ec: 1.11.1.11 Engineered: Yes		Organism_scientific: Glycine Max Organism_common: Soybean Organism_taxid: 3847 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Sg13009 Expression_system_plasmid: Papx4 Other_details: N-Terminal 6-His Tag
symmetry	Space Group: P 42 21 2	R_factor 0.161 R_Free 0.196
crystal cell	length a length b length c angle alpha angle beta angle gamma 81.328 81.328 74.884 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.40 Å
ligand	ASC, HEM, NA	enzyme	Oxidoreductase E.C.1.11.1.11 BRENDA
related structures	by homologous chain: 1V0H
Gene Ontology	Chain Function Process Component A peroxidase activity L-ascorbate peroxidase activ...
Primary reference	Crystal structure of the ascorbate peroxidase-ascorbate complex., Sharp KH, Mewies M, Moody PC, Raven EL, Nat Struct Biol 2003 Apr;10(4):303-7. PMID:12640445

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (101 Kb) [Save to disk] Biological Unit Coordinates (1oaf.pdb1.gz) 95 Kb LPC: Ligand-Protein Contacts for 1OAF CSU: Contacts of Structural Units for 1OAF Likely Quarternary Molecular Structure file(s) for 1OAF Structure Factors (728 Kb) Retrieve 1OAF in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1OAF from S2C, [Save to disk] Re-refined 1oaf structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1OAF in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1OAF

Ramachandran plot from PDBSum

Structure-derived information

Conformational Epitope Prediction for 1OAF from the CEP Server. Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1OAF, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1oafa_, region A [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1oaf] [1oaf_A] SWISS-PROT database: [Q43758] Domain organization of [Q43758_SOYBN] by SWISSPFAM

Other resources with information on 1OAF

Community annotation for 1OAF at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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