1OBN Oxidoreductase date Jan 31, 2003
title Isopenicillin N Synthase Aminoadipoyl-Cysteinyl-Aminobutyrat Complex
authors A.J.Long, I.J.Clifton, P.L.Roach, J.E.Baldwin, C.J.Schofield, P.J
compound source
Molecule: Isopenicillin N Synthetase
Chain: A
Synonym: Isopenicillin N Synthase
Engineered: Yes
Organism_scientific: Emericella Nidulans
Organism_common: Aspergillus Nidulans
Organism_taxid: 162425
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Nm554
Expression_system_plasmid: Pjb703
symmetry Space Group: P 21 21 21
R_factor 0.166 R_Free 0.189
crystal
cell
length a length b length c angle alpha angle beta angle gamma
46.750 71.350 101.200 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.30 Å
ligand ASV, FE2, HOA, SO4 enzyme
related structures by homologous chain: 1BK0, 1W04
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural studies on the reaction of isopenicillin N synthase with the substrate analogue delta-(l-alpha-aminoadipoyl)-l-cysteinyl-d-alpha-aminobutyrate., Long AJ, Clifton IJ, Roach PL, Baldwin JE, Schofield CJ, Rutledge PJ, Biochem J 2003 Jun 15;372(Pt 3):687-93. PMID:12622704
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (67 Kb) [Save to disk]
  • Biological Unit Coordinates (1obn.pdb1.gz) 58 Kb
  • LPC: Ligand-Protein Contacts for 1OBN
  • CSU: Contacts of Structural Units for 1OBN
  • Likely Quarternary Molecular Structure file(s) for 1OBN
  • Structure Factors (515 Kb)
  • Retrieve 1OBN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1OBN from S2C, [Save to disk]
  • Re-refined 1obn structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1OBN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1OBN
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Conformational Epitope Prediction for 1OBN from the CEP Server.
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1OBN, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1obna_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1obn] [1obn_A]
  • SWISS-PROT database: [P05326]
  • Domain organization of [IPNS_EMENI] by SWISSPFAM
  • Other resources with information on 1OBN
  • Community annotation for 1OBN at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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