1OE7 Transferase date Mar 19, 2003
title 28kda Glutathione S-Transferase From Schistosoma Haematobium
authors K.A.Johnson, F.Angelucci, D.Tsernoglou
compound source
Molecule: Glutathione S-Transferase
Chain: A, B
Ec: 2.5.1.18
Engineered: Yes
Organism_scientific: Schistosoma Haematobium
Organism_common: Blood Fluke
Organism_taxid: 6185
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_plasmid: Pet-24d(+)
symmetry Space Group: P 1 21 1
R_factor 0.229 R_Free 0.289
crystal
cell
length a length b length c angle alpha angle beta angle gamma
53.427 78.111 53.502 90.00 94.21 90.00
method X-Ray Diffractionresolution 1.80 Å
ligand GSH enzyme Transferase E.C.2.5.1.18 BRENDA
related structures by homologous chain: 1OE8
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceCrystal structure of the 28 kDa glutathione S-transferase from Schistosoma haematobium., Johnson KA, Angelucci F, Bellelli A, Herve M, Fontaine J, Tsernoglou D, Capron A, Trottein F, Brunori M, Biochemistry 2003 Sep 2;42(34):10084-94. PMID:12939136
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (77 Kb) [Save to disk]
  • Biological Unit Coordinates (1oe7.pdb1.gz) 72 Kb
  • LPC: Ligand-Protein Contacts for 1OE7
  • CSU: Contacts of Structural Units for 1OE7
  • Likely Quarternary Molecular Structure file(s) for 1OE7
  • Structure Factors (267 Kb)
  • Retrieve 1OE7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1OE7 from S2C, [Save to disk]
  • Re-refined 1oe7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1OE7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1OE7
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1OE7, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1oe7a2, region A:4-84 [Jmol] [rasmolscript] [script source]
        - Domain d1oe7a1, region A:85-207 [Jmol] [rasmolscript] [script source]
        - Domain d1oe7b2, region B:5-84 [Jmol] [rasmolscript] [script source]
        - Domain d1oe7b1, region B:85-207 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1oe7_A] [1oe7] [1oe7_B]
  • SWISS-PROT database: [P30114]
  • Domain organization of [GST28_SCHHA] by SWISSPFAM
  • Other resources with information on 1OE7
  • Community annotation for 1OE7 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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