1OEZ	Oxidoreductase	date	Apr 02, 2003
title	Zn His46arg Mutant Of Human Cu, Zn Superoxide Dismutase
authors	R.W.Strange, S.Antonyuk, M.A.Hough, P.Doucette, J.Rodriguez, J.S. P.J.Hart, L.J.Hayward, J.S.Valentine, S.S.Hasnain
compound		source
Molecule: Superoxide Dismutase [Cu-Zn] Chain: W, X, Y, Z Ec: 1.15.1.1 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Saccharomyces Cerevisiae Expression_system_taxid: 4932 Expression_system_strain: Eg118 Expression_system_variant: Yep351
symmetry	Space Group: P 41 21 2	R_factor 0.206 R_Free 0.234
crystal cell	length a length b length c angle alpha angle beta angle gamma 190.812 190.812 34.666 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.15 Å
ligand	SO4, ZN	enzyme	Oxidoreductase E.C.1.15.1.1 BRENDA
related structures	by homologous chain: 1CB4, 3SOD
Gene Ontology	Chain Function Process Component Z, W, X, Y superoxide dismutase activit... protein binding anterograde axonal transport... retrograde axonal transport
Primary reference	Amyloid-like filaments and water-filled nanotubes formed by SOD1 mutant proteins linked to familial ALS., Elam JS, Taylor AB, Strange R, Antonyuk S, Doucette PA, Rodriguez JA, Hasnain SS, Hayward LJ, Valentine JS, Yeates TO, Hart PJ, Nat Struct Biol 2003 Jun;10(6):461-7. PMID:12754496

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (85 Kb) [Save to disk] Biological Unit Coordinates (1oez.pdb1.gz) 40 Kb Biological Unit Coordinates (1oez.pdb2.gz) 40 Kb LPC: Ligand-Protein Contacts for 1OEZ CSU: Contacts of Structural Units for 1OEZ Likely Quarternary Molecular Structure file(s) for 1OEZ Structure Factors (274 Kb) Retrieve 1OEZ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1OEZ from S2C, [Save to disk] Re-refined 1oez structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1OEZ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1OEZ

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1OEZ, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1oezw_, region W [Jmol] [rasmolscript] [script source]     - Domain d1oezx_, region X [Jmol] [rasmolscript] [script source]     - Domain d1oezy_, region Y [Jmol] [rasmolscript] [script source]     - Domain d1oezz_, region Z [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1oez_Z] [1oez_Y] [1oez_X] [1oez_W] [1oez] SWISS-PROT database: [P00441] Domain organization of [SODC_HUMAN] by SWISSPFAM

Other resources with information on 1OEZ

Community annotation for 1OEZ at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---