1OFG	Oxidoreductase	date	Oct 17, 1996
title	Glucose-Fructose Oxidoreductase
authors	R.L.Kingston, R.K.Scopes, E.N.Baker
compound		source
Molecule: Glucose-Fructose Oxidoreductase Chain: A, B, C, D, E, F Ec: 1.1.99.28		Organism_scientific: Zymomonas Mobilis Organism_taxid: 542 Cellular_location: Periplasm
symmetry	Space Group: P 21 21 2	R_factor 0.203 R_Free NULL
crystal cell	length a length b length c angle alpha angle beta angle gamma 84.490 283.690 116.990 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.70 Å
ligand	NDP	enzyme	Oxidoreductase E.C.1.1.99.28 BRENDA
related structures	by homologous chain: 1EVJ, 1H6B
Gene Ontology	Chain Function Process Component F, A, D, C, E, B
Primary reference	The structure of glucose-fructose oxidoreductase from Zymomonas mobilis: an osmoprotective periplasmic enzyme containing non-dissociable NADP., Kingston RL, Scopes RK, Baker EN, Structure 1996 Dec 15;4(12):1413-28. PMID:8994968

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (371 Kb) [Save to disk] Biological Unit Coordinates (1ofg.pdb1.gz) 245 Kb Biological Unit Coordinates (1ofg.pdb2.gz) 247 Kb LPC: Ligand-Protein Contacts for 1OFG CSU: Contacts of Structural Units for 1OFG Likely Quarternary Molecular Structure file(s) for 1OFG Structure Factors (576 Kb) Retrieve 1OFG in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1OFG from S2C, [Save to disk] Re-refined 1ofg structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1OFG in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1OFG

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1OFG, from MSDmotif at EBI Genome occurence of 1OFG's fold from GeneCensus Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1ofga1, region A:1-160,A:323-381 [Jmol] [rasmolscript] [script source]     - Domain d1ofga2, region A:161-322 [Jmol] [rasmolscript] [script source]     - Domain d1ofgb1, region B:1-160,B:323-381 [Jmol] [rasmolscript] [script source]     - Domain d1ofgb2, region B:161-322 [Jmol] [rasmolscript] [script source]     - Domain d1ofgc1, region C:1-160,C:323-381 [Jmol] [rasmolscript] [script source]     - Domain d1ofgc2, region C:161-322 [Jmol] [rasmolscript] [script source]     - Domain d1ofgd1, region D:1-160,D:323-381 [Jmol] [rasmolscript] [script source]     - Domain d1ofgd2, region D:161-322 [Jmol] [rasmolscript] [script source]     - Domain d1ofge1, region E:1-160,E:323-381 [Jmol] [rasmolscript] [script source]     - Domain d1ofge2, region E:161-322 [Jmol] [rasmolscript] [script source]     - Domain d1ofgf1, region F:1-160,F:323-381 [Jmol] [rasmolscript] [script source]     - Domain d1ofgf2, region F:161-322 [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1ofg] [1ofg_F] [1ofg_D] [1ofg_B] [1ofg_C] [1ofg_A] [1ofg_E] SWISS-PROT database: [Q07982] Domain organization of [GFO_ZYMMO] by SWISSPFAM

Other resources with information on 1OFG

Community annotation for 1OFG at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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