1OM1 Transferase date Feb 24, 2003
title Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
authors R.Battistutta, E.De Moliner, G.Zanotti
compound source
Molecule: Casein Kinase II, Alpha Chain
Chain: A
Synonym: Ck II, Ck2-Alpha
Ec: 2.7.1.37
Organism_scientific: Zea Mays
Organism_taxid: 4577
symmetry Space Group: C 1 2 1
R_factor 0.206 R_Free 0.227
crystal
cell
length a length b length c angle alpha angle beta angle gamma
141.524 60.276 44.546 90.00 102.63 90.00
method X-Ray Diffractionresolution 1.68 Å
ligand IQA enzyme Transferase E.C.2.7.1.37 BRENDA
related structures by homologous chain: 1M2R, 1YMI
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceBiochemical and three-dimensional-structural study of the specific inhibition of protein kinase CK2 by [5-oxo-5,6-dihydroindolo-(1,2-a)quinazolin-7-yl]acetic acid (IQA)., Sarno S, de Moliner E, Ruzzene M, Pagano MA, Battistutta R, Bain J, Fabbro D, Schoepfer J, Elliott M, Furet P, Meggio F, Zanotti G, Pinna LA, Biochem J 2003 Sep 15;374(Pt 3):639-46. PMID:12816539
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (64 Kb) [Save to disk]
  • Biological Unit Coordinates (1om1.pdb1.gz) 60 Kb
  • LPC: Ligand-Protein Contacts for 1OM1
  • CSU: Contacts of Structural Units for 1OM1
  • Likely Quarternary Molecular Structure file(s) for 1OM1
  • Retrieve 1OM1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1OM1 from S2C, [Save to disk]
  • View 1OM1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1OM1
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1OM1, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1om1a_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1om1] [1om1_A]
  • SWISS-PROT database: [P28523]
  • Domain organization of [CSK2A_MAIZE] by SWISSPFAM
  • Domain found in 1OM1: [S_TKc ] by SMART
  • Other resources with information on 1OM1
  • Community annotation for 1OM1 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science