1OQ2 Dna date Mar 07, 2003
title Nmr Structure Of Hemimethylated Gatc Site
authors S.H.Bae, H.K.Cheong, S.Kang, D.S.Hwang, C.Cheong, B.S.Choi
compound source
Molecule: 5'-D(Gpcpgpapgpaptpcptpgpcpg)-3'
Chain: A
Engineered: Yes
 Synthetic: Yes
Other_details: Chemical Synthesis

Molecule: 5'-D(Cpgpcpapgp(6ma)Ptpcptpcpgpc)-3'
Chain: B
Engineered: Yes
Synthetic: Yes
Other_details: Chemical Synthesis
methodSolution NMR
ligand 6MA enzyme
Primary referenceStructure and dynamics of hemimethylated GATC sites: implications for DNA-SeqA recognition., Bae SH, Cheong HK, Cheong C, Kang S, Hwang DS, Choi BS, J Biol Chem 2003 Nov 14;278(46):45987-93. Epub 2003 Aug 27. PMID:12944412
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (221 Kb) [Save to disk]
  • Biological Unit Coordinates (1oq2.pdb1.gz) 15 Kb
  • LPC: Ligand-Protein Contacts for 1OQ2
  • CSU: Contacts of Structural Units for 1OQ2
  • Original NMR restraints for 1OQ2 from PDB
  • Retrieve 1OQ2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1OQ2 from S2C, [Save to disk]
    • View 1OQ2 in 3D
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    • Visual 3D analysis of 1OQ2
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1OQ2, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1oq2] [1oq2_A] [1oq2_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 1OQ2
  • Community annotation for 1OQ2 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
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