1OX3 Chaperone date Apr 01, 2003
title Crystal Structure Of Mini-Fibritin
authors S.P.Boudko, J.Stetefeld
compound source
Molecule: Fibritin
Chain: A
Fragment: Unp Residues 2-81 And 456-484
Synonym: Collar Protein,Whisker Antigen Control Protein,Col Protein,Whisker Antigen Control Protein;
Engineered: Yes
 Organism_scientific: Enterobacteria Phage T4
Organism_taxid: 10665
Gene: Wac
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Pet23d(+)
Expression_system_plasmid: Pnccf
symmetry Space Group: P 63
R_factor 0.209 R_Free 0.221
crystal
cell
length a length b length c angle alpha angle beta angle gamma
54.615 54.615 107.848 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.00 Å
related structures by homologous chain: 1V1I
Primary referenceDesign and Crystal Structure of Bacteriophage T4 Mini-Fibritin NCCF., Boudko SP, Strelkov SV, Engel J, Stetefeld J, J Mol Biol 2004 Jun 11;339(4):927-35. PMID:15165860
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (23 Kb) [Save to disk]
  • Biological Unit Coordinates (1ox3.pdb1.gz) 54 Kb
  • CSU: Contacts of Structural Units for 1OX3
  • Likely Quarternary Molecular Structure file(s) for 1OX3
  • Structure Factors (102 Kb)
  • Retrieve 1OX3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1OX3 from S2C, [Save to disk]
  • Re-refined 1ox3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1OX3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1OX3
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1OX3, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1ox3a_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ox3] [1ox3_A]
  • SWISS-PROT database: [P10104]
  • Domain organization of [WAC_BPT4] by SWISSPFAM
    • Other resources with information on 1OX3
  • Community annotation for 1OX3 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science