1OZ2	Transcription	date	Apr 07, 2003
title	Crystal Structure Of 3-Mbt Repeats Of Lethal (3) Malignant B (Native-II) At 1.55 Angstrom
authors	W.K.Wang, V.Tereshko, P.Boccuni, D.Macgrogan, S.D.Nimer, D.J.Pate
compound		source
Molecule: Lethal(3)Malignant Brain Tumor-Like Protein Chain: A Fragment: Residues 197-527 Synonym: L3, Mbt-Like, L3, Mbt Protein Homolog, H-L3, Mbt P L3, Mbt; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Tissue: Brain Gene: L3mbtl Or L3mbt Or Kiaa0681 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21-De(3)Rp Expression_system_vector_type: Plasmid Expression_system_plasmid: Pgex-4t-3
symmetry	Space Group: P 21 21 2	R_factor 0.189 R_Free 0.219
crystal cell	length a length b length c angle alpha angle beta angle gamma 86.680 93.403 58.578 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.55 Å
ligand	MES, SO4	enzyme
note	1OZ2 is a representative structure
related structures	by homologous chain: 1OYX
Gene Ontology	Chain Function Process Component A
Primary reference	Malignant brain tumor repeats: a three-leaved propeller architecture with ligand/peptide binding pockets., Wang WK, Tereshko V, Boccuni P, MacGrogan D, Nimer SD, Patel DJ, Structure (Camb) 2003 Jul;11(7):775-89. PMID:12842041

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (69 Kb) [Save to disk] Biological Unit Coordinates (1oz2.pdb1.gz) 63 Kb LPC: Ligand-Protein Contacts for 1OZ2 CSU: Contacts of Structural Units for 1OZ2 Likely Quarternary Molecular Structure file(s) for 1OZ2 Structure Factors (533 Kb) Retrieve 1OZ2 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1OZ2 from S2C, [Save to disk] Re-refined 1oz2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1OZ2 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1OZ2

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1OZ2, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1oz2a1, region A:204-313 [Jmol] [rasmolscript] [script source]     - Domain d1oz2a2, region A:314-421 [Jmol] [rasmolscript] [script source]     - Domain d1oz2a3, region A:422-527 [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1oz2_A] [1oz2] SWISS-PROT database: [Q9Y468] Domain organization of [LMBL1_HUMAN] by SWISSPFAM Domain found in 1OZ2: [MBT ] by SMART

Other resources with information on 1OZ2

Community annotation for 1OZ2 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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