1OZU	Oxidoreductase	date	Apr 09, 2003
title	Crystal Structure Of Familial Als Mutant S134n Of Human Cu,Z Superoxide Dismutase (Cuznsod) To 1.3a Resolution
authors	J.S.Elam, A.B.Taylor, R.Strange, S.Antonyuk, P.A.Doucette, J.A.Ro S.S.Hasnain, L.J.Hayward, J.S.Valentine, T.O.Yeates, P.J.Hart
compound		source
Molecule: Superoxide Dismutase [Cu-Zn] Chain: A, B Ec: 1.15.1.1 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Sod1 Expression_system: Saccharomyces Cerevisiae Expression_system_common: Baker'S Yeast Expression_system_taxid: 4932 Expression_system_strain: Eg103 Expression_system_vector_type: Plasmid Expression_system_plasmid: Yep 351
symmetry	Space Group: P 21 21 21	R_factor 0.177 R_Free 0.193
crystal cell	length a length b length c angle alpha angle beta angle gamma 40.086 56.457 105.350 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.30 Å
ligand	CSX, SO4, ZN	enzyme	Oxidoreductase E.C.1.15.1.1 BRENDA
related structures	by homologous chain: 1P1V, 1Q0E
Gene Ontology	Chain Function Process Component A, B superoxide dismutase activit... protein binding anterograde axonal transport... retrograde axonal transport
Primary reference	Amyloid-like filaments and water-filled nanotubes formed by SOD1 mutant proteins linked to familial ALS., Elam JS, Taylor AB, Strange R, Antonyuk S, Doucette PA, Rodriguez JA, Hasnain SS, Hayward LJ, Valentine JS, Yeates TO, Hart PJ, Nat Struct Biol 2003 Jun;10(6):461-7. PMID:12754496

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (93 Kb) [Save to disk] Biological Unit Coordinates (1ozu.pdb1.gz) 87 Kb LPC: Ligand-Protein Contacts for 1OZU CSU: Contacts of Structural Units for 1OZU Likely Quarternary Molecular Structure file(s) for 1OZU Structure Factors (807 Kb) Retrieve 1OZU in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1OZU from S2C, [Save to disk] Re-refined 1ozu structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1OZU in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1OZU

Ramachandran plot from PDBSum

Structure-derived information

Conformational Epitope Prediction for 1OZU 1OZUA 1OZUB from the CEP Server. Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1OZU, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1ozua_, region A [Jmol] [rasmolscript] [script source]     - Domain d1ozub_, region B [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1ozu] [1ozu_A] [1ozu_B] SWISS-PROT database: [P00441] Domain organization of [SODC_HUMAN] by SWISSPFAM

Other resources with information on 1OZU

Community annotation for 1OZU at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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