1P20 Surprising Roles of Electrostatic Interactions in DNA-Ligand Complexes date
authors Howerton, S.B., Nagpal, A., Williams, L.D.
compound source
symmetry
R_factor
R_Free 0.215
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.34
ligand DM2, TL enzyme
Primary referenceSurprising roles of electrostatic interactions in DNA-ligand complexes., Howerton SB, Nagpal A, Williams LD, Biopolymers 2003 May;69(1):87-99. PMID:12717724
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (9 Kb) [Save to disk]
  • Biological Unit Coordinates (1p20.pdb1.gz) 8 Kb
  • LPC: Ligand-Protein Contacts for 1P20
  • CSU: Contacts of Structural Units for 1P20
  • Likely Quarternary Molecular Structure file(s) for 1P20
  • Retrieve 1P20 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1P20 from S2C, [Save to disk]
  • View 1P20 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1P20
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1P20, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1p20_A] [1p20]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 1P20
  • Community annotation for 1P20 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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