1P2V	Signaling Protein	date	Apr 16, 2003
title	H-Ras 166 In 60 % 1,6 Hexanediol
authors	G.K.Buhrman, V.De Serrano, C.Mattos
compound		source
Molecule: Transforming Protein P21h-Ras-1 Chain: A Synonym: C-H-Ras Engineered: Yes Other_details: C-Terminal Truncation		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Hras Or Hras1 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_cell_line: Jm105 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pat
symmetry	Space Group: P 32 2 1	R_factor 0.210 R_Free 0.252
crystal cell	length a length b length c angle alpha angle beta angle gamma 40.360 40.360 161.640 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.30 Å
ligand	GNP, HEZ, MG	enzyme
related structures	by homologous chain: 221P, 621P
Gene Ontology	Chain Function Process Component A
Primary reference	Organic solvents order the dynamic switch II in Ras crystals., Buhrman G, de Serrano V, Mattos C, Structure (Camb) 2003 Jul;11(7):747-51. PMID:12842038

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (34 Kb) [Save to disk] Biological Unit Coordinates (1p2v.pdb1.gz) 29 Kb LPC: Ligand-Protein Contacts for 1P2V CSU: Contacts of Structural Units for 1P2V Likely Quarternary Molecular Structure file(s) for 1P2V Structure Factors (93 Kb) Retrieve 1P2V in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1P2V from S2C, [Save to disk] Re-refined 1p2v structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1P2V in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1P2V

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1P2V, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1p2va_, region A [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1p2v_A] [1p2v] SWISS-PROT database: [P01112] Domain organization of [RASH_HUMAN] by SWISSPFAM Domain found in 1P2V: [RAS ] by SMART

Other resources with information on 1P2V

Community annotation for 1P2V at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---