1P7T Lyase date May 05, 2003
title Structure Of Escherichia Coli Malate Synthase G:Pyruvate:Ace Coenzyme A Abortive Ternary Complex At 1.95 Angstrom Resolu
authors D.M.Anstrom, K.Kallio, S.J.Remington
compound source
Molecule: Malate Synthase G
Chain: A
Synonym: Msg
Ec: 2.3.3.9
Engineered: Yes
Mutation: Yes
Organism_scientific: Escherichia Coli Str. K12 Substr.
Organism_taxid: 316407
Strain: W3110
Gene: Glcb Or Glc Or B2976
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Jm-109(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet-28b

Molecule: Malate Synthase G
Chain: B
Synonym: Msg
Ec: 2.3.3.9
Engineered: Yes
Mutation: Yes

Organism_scientific: Escherichia Coli Str. K12 Substr.
Organism_taxid: 316407
Strain: W3110
Gene: Glcb Or Glc Or B2976
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Jm-109(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet-28b
symmetry Space Group: P 21 21 21
R_factor 0.194 R_Free 0.294
crystal
cell
length a length b length c angle alpha angle beta angle gamma
73.931 107.394 204.974 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.95 Å
ligand ACO, CSO, MG, PEG, PG4, PYR enzyme Transferase E.C.2.3.3.9 BRENDA
related structures by homologous chain: 1D8C
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructure of the Escherichia coli malate synthase G:pyruvate:acetyl-coenzyme A abortive ternary complex at 1.95 A resolution., Anstrom DM, Kallio K, Remington SJ, Protein Sci 2003 Sep;12(9):1822-32. PMID:12930982
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (237 Kb) [Save to disk]
  • Biological Unit Coordinates (1p7t.pdb1.gz) 118 Kb
  • Biological Unit Coordinates (1p7t.pdb2.gz) 116 Kb
  • LPC: Ligand-Protein Contacts for 1P7T
  • CSU: Contacts of Structural Units for 1P7T
  • Likely Quarternary Molecular Structure file(s) for 1P7T
  • Structure Factors (829 Kb)
  • Retrieve 1P7T in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1P7T from S2C, [Save to disk]
  • Re-refined 1p7t structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1P7T in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1P7T
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1P7T, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1p7ta_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1p7tb_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1p7t_B] [1p7t_A] [1p7t]
  • SWISS-PROT database: [P37330]
  • Domain organization of [MASZ_ECOLI] by SWISSPFAM
  • Other resources with information on 1P7T
  • Community annotation for 1P7T at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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