1P8A Hydrolase date May 06, 2003
title Solution Structure Of The Low Molecular Weight Protein Tyros Phosphatase From Tritrichomonas Foetus
authors C.L.Gustafson, C.V.Stauffacher, K.Hallenga, R.L.Van Etten
compound source
Molecule: Protein Tyrosine Phosphatase
Chain: A
Ec: 3.1.3.48
Engineered: Yes
Mutation: Yes
 Organism_scientific: Tritrichomonas Foetus
Organism_taxid: 5724
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet23d
methodSolution NMR
ligand
enzyme Hydrolase E.C.3.1.3.48 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A
  • protein tyrosine phosphatase...


    • Primary referenceSolution structure of the low-molecular-weight protein tyrosine phosphatase from Tritrichomonas foetus reveals a flexible phosphate binding loop., Gustafson CL, Stauffacher CV, Hallenga K, Van Etten RL, Protein Sci 2005 Oct;14(10):2515-25. PMID:16195543
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (787 Kb) [Save to disk]
  • Biological Unit Coordinates (1p8a.pdb1.gz) 42 Kb
  • CSU: Contacts of Structural Units for 1P8A
  • Original NMR restraints for 1P8A from PDB
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1P8A in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1P8A from S2C, [Save to disk]
    • View 1P8A in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1P8A
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1P8A, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1p8aa_, region A [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1p8a] [1p8a_A]
  • SWISS-PROT database: [O00810]
  • Domain organization of [O00810_TRIFO] by SWISSPFAM
  • Domain found in 1P8A: [LMWPc ] by SMART
    • Other resources with information on 1P8A
  • Community annotation for 1P8A at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
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  • Images from IMB Jena Image Library of Biological Macromolecules.

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