1P8B Plant Protein date May 06, 2003
title Solution Structure Of Pa1b, A 37-Amino Acid Insecticidal Pro Extracted From Pea Seeds (Pisum Sativum)
authors L.Jouvensal, L.Quillien, E.Ferrasson, Y.Rahbe, J.Gueguen, F.Vovel
compound source
Molecule: Pea Albumin 1, Subunit B
Chain: A
Synonym: Pa1b, Albumin A1b, Leginsulin
 Organism_scientific: Pisum Sativum
Organism_common: Pea
Organism_taxid: 3888
Strain: Cv. Frilene
Other_details: Isolated From Pea Seeds
methodSolution NMR
note 1P8B is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referencePA1b, an insecticidal protein extracted from pea seeds (Pisum sativum): 1H-2-D NMR study and molecular modeling., Jouvensal L, Quillien L, Ferrasson E, Rahbe Y, Gueguen J, Vovelle F, Biochemistry 2003 Oct 21;42(41):11915-23. PMID:14556622
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (127 Kb) [Save to disk]
  • Biological Unit Coordinates (1p8b.pdb1.gz) 9 Kb
  • CSU: Contacts of Structural Units for 1P8B
  • Retrieve 1P8B in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1P8B from S2C, [Save to disk]
    • View 1P8B in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1P8B
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1P8B, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1p8ba_, region A [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1p8b] [1p8b_A]
  • SWISS-PROT database: [P62931]
  • Domain organization of [ALB1F_PEA] by SWISSPFAM
    • Other resources with information on 1P8B
  • Community annotation for 1P8B at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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