1PAL Calcium Binding Protein date Nov 08, 1990
title Ionic Interactions With Parvalbumins. Crystal Structure Determination Of Pike 4.10 Parvalbumin In Four Different Ionic Environments
authors J.P.Declercq, B.Tinant, J.Parello, J.Rambaud
compound source
Molecule: Parvalbumin
Chain: A
Engineered: Yes
 Organism_scientific: Esox Lucius
Organism_common: Northern Pike
Organism_taxid: 8010
symmetry Space Group: P 21 21 2
R_factor
R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
59.500 59.630 26.240 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.65 Å
ligand ACE, CA, NH4 enzyme
related structures by homologous chain: 1BU3, 5CPV
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceIonic interactions with parvalbumins. Crystal structure determination of pike 4.10 parvalbumin in four different ionic environments., Declercq JP, Tinant B, Parello J, Rambaud J, J Mol Biol 1991 Aug 20;220(4):1017-39. PMID:1880797
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (23 Kb) [Save to disk]
  • Biological Unit Coordinates (1pal.pdb1.gz) 19 Kb
  • LPC: Ligand-Protein Contacts for 1PAL
  • CSU: Contacts of Structural Units for 1PAL
  • Likely Quarternary Molecular Structure file(s) for 1PAL
  • Structure Factors (54 Kb)
  • Retrieve 1PAL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1PAL from S2C, [Save to disk]
  • Re-refined 1pal structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1PAL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1PAL
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1PAL, from MSDmotif at EBI
  • Genome occurence of 1PAL's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1pal__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1pal_A] [1pal]
  • SWISS-PROT database: [P02619]
  • Domain organization of [PRVB_ESOLU] by SWISSPFAM
  • Domain found in 1PAL: [EFh ] by SMART
    • Other resources with information on 1PAL
  • Community annotation for 1PAL at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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