1PKT Phosphotransferase date Mar 07, 1994
title Structure Of The Pi3k Sh3 Domain And Analysis Of The Sh3 Fam
authors S.Koyama, H.Yu, D.C.Dalgarno, T.B.Shin, L.D.Zydowsky, S.L.Schreib
compound source
Molecule: Phosphatidylinositol 3-Kinase P85-Alpha Subunit S
Chain: A
Ec: 2.7.1.137
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
methodSolution NMR
ligand
enzyme Transferase E.C.2.7.1.137 BRENDA
related structures by homologous chain: 1PHT, 1PKS
Primary referenceStructure of the PI3K SH3 domain and analysis of the SH3 family., Koyama S, Yu H, Dalgarno DC, Shin TB, Zydowsky LD, Schreiber SL, Cell 1993 Mar 26;72(6):945-52. PMID:7681364
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (593 Kb) [Save to disk]
  • Biological Unit Coordinates (1pkt.pdb1.gz) 20 Kb
  • CSU: Contacts of Structural Units for 1PKT
  • Retrieve 1PKT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1PKT from S2C, [Save to disk]
  • View 1PKT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1PKT
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1PKT, from MSDmotif at EBI
  • Genome occurence of 1PKT's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1pkt__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1pkt] [1pkt_A]
  • SWISS-PROT database: [P27986]
  • Domain organization of [P85A_HUMAN] by SWISSPFAM
  • Domain found in 1PKT: [SH3 ] by SMART
  • Other resources with information on 1PKT
  • Community annotation for 1PKT at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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