1PM5 | Hydrolase Dna | date | Jun 10, 2003 |
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title | Crystal Structure Of Wild Type Lactococcus Lactis Fpg Comple Tetrahydrofuran Containing Dna | ||||||||||||||
authors | K.Pereira De Jesus-Tran, L.Serre, C.Zelwer, B.Castaing | ||||||||||||||
compound | source | ||||||||||||||
Molecule: Dna (5'-D(Cptpcptptptp(3dr)Ptptptpcpt 3'); Chain: D Engineered: Yes |
Synthetic: Yes Other_details: Synyhetic | ||||||||||||||
Molecule: Dna (5'-D(Gpcpgpapgpapapapcpapapapgp Chain: E Engineered: Yes |
Synthetic: Yes Other_details: Synthetic | ||||||||||||||
Molecule: Formamidopyrimidine-Dna Glycosylase Chain: A Fragment: Fpg Synonym: Fapy-Dna Glycosylase Ec: 3.2.2.23 Engineered: Yes |
Organism_scientific: Lactococcus Lactis Subsp. Cremoris Organism_taxid: 1359 Strain: Subsp. Cremoris Gene: Mutm Or Fpg Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pmal-C | ||||||||||||||
symmetry | Space Group: P 41 21 2 |
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crystal cell |
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method | X-Ray Diffraction | resolution | 1.95 Å | ||||||||||||
ligand | 3DR, GOL, ZN | enzyme | Hydrolase E.C.3.2.2.23 BRENDA | ||||||||||||
related structures | by homologous chain: 1KFV, 1NNJ | ||||||||||||||
Gene Ontology |
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Primary reference | Structural insights into abasic site for Fpg specific binding and catalysis: comparative high-resolution crystallographic studies of Fpg bound to various models of abasic site analogues-containing DNA., Pereira de Jesus K, Serre L, Zelwer C, Castaing B, Nucleic Acids Res. 2005 Oct 20;33(18):5936-44. Print 2005. PMID:16243784 |
Data retrieval |
View 1PM5 in 3D |
Visual 3D analysis of 1PM5 |
Structure-derived information |
- Domain d1pm5a2, region A:1-131 [Jmol] [rasmolscript] [script source] - Domain d1pm5a1, region A:132-222 [Jmol] [rasmolscript] [script source] - Domain d1pm5a3, region A:223-271 [Jmol] [rasmolscript] [script source] |
Sequence-derived information |
Other resources with information on 1PM5 |
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OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science |